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1

TNT, a free program for phylogenetic analysis

Pablo A. Goloboff, James S. Farris, Kevin C. Nixon

Journal:

Year:

2008

Language:

english

File:

PDF, 850 KB

english, 2008

2

A summit of cladistics: abstracts of the 27th Annual Meeting of the Willi Hennig Society and VIII Reunión Argentina de Cladística y Biogeografía

Claudia Szumik, Pablo Goloboff

Journal:

Year:

2010

Language:

english

File:

PDF, 429 KB

english, 2010

3

Computer science and parsimony: a reappraisal, with discussion of methods for poorly structured datasets

Goloboff, Pablo A.

Journal:

Year:

2015

Language:

english

File:

PDF, 269 KB

english, 2015

4

Linothele cavicola, A New Diplurine Spider (Araneae, Dipluridae) from Caves in Ecuador

Pablo A. Goloboff

Journal:

Journal of Arachnology

Year:

1994

Language:

english

File:

PDF, 549 KB

english, 1994

5

TNT version 1.5, including a full implementation of phylogenetic morphometrics

Goloboff, Pablo A., Catalano, Santiago A.

Journal:

Year:

2016

Language:

english

File:

PDF, 625 KB

english, 2016

6

Comparing tree shapes: beyond symmetry

Goloboff, Pablo A., S. Arias, Joan, Szumik, Claudia A.

Journal:

Zoologica Scripta

Year:

2017

Language:

english

File:

PDF, 572 KB

english, 2017

7

On defining a unique phylogenetic tree with homoplastic characters

Goloboff, Pablo A., Wilkinson, Mark

Journal:

Molecular Phylogenetics and Evolution

Year:

2018

Language:

english

File:

PDF, 563 KB

english, 2018

8

Optimization of Polytomies: State Set and Parallel Operations

Pablo A. Goloboff

Journal:

Molecular Phylogenetics and Evolution

Year:

2002

Language:

english

File:

PDF, 87 KB

english, 2002

9

PTP is Meaningless, T-PTP is Contradictory: A Reply to Trueman

James M. Carpenter, Pablo A. Goloboff, James S. Farris

Journal:

Year:

1998

Language:

english

File:

PDF, 135 KB

english, 1998

10

Analyzing Large Data Sets in Reasonable Times: Solutions for Composite Optima

Pablo A. Goloboff

Journal:

Year:

1999

Language:

english

File:

PDF, 196 KB

english, 1999

11

Self-Weighted Optimization: Tree Searches and Character State Reconstructions under Implied Transformation Costs

Pablo A. Goloboff

Journal:

Year:

1997

Language:

english

File:

PDF, 200 KB

english, 1997

12

Tree Searches Under Sankoff Parsimony

Pablo A. Goloboff

Journal:

Year:

1998

Language:

english

File:

PDF, 201 KB

english, 1998

13

Methods for Quick Consensus Estimation

Pablo A. Goloboff, James S. Farris

Journal:

Year:

2001

Language:

english

File:

PDF, 162 KB

english, 2001

14

Parsimony, likelihood, and simplicity

Pablo A. Goloboff

Journal:

Year:

2003

Language:

english

File:

PDF, 259 KB

english, 2003

15

Semi-strict supertrees

Pablo A Goloboff, Diego Pol

Journal:

Year:

2002

Language:

english

File:

PDF, 200 KB

english, 2002

16

Improvements to resampling measures of group support

Pablo A Goloboff, James S Farris, Mari Källersjö, Bengt Oxelman, Martıacute, n J Ramıacute, rez, Claudia A Szumik

Journal:

Year:

2003

Language:

english

File:

PDF, 222 KB

english, 2003

17

Minority rule supertrees? MRP, Compatibility, and Minimum Flip may display the least frequent groups

Pablo A. Goloboff

Journal:

Year:

2005

Language:

english

File:

PDF, 317 KB

english, 2005

18

Calculating SPR distances between trees

Pablo A. Goloboff

Journal:

Year:

2008

Language:

english

File:

PDF, 409 KB

english, 2008

19

Continuous characters analyzed as such

Pablo A. Goloboff, Camilo I. Mattoni, Andrés Sebastián Quinteros

Journal:

Year:

2006

Language:

english

File:

PDF, 2.42 MB

english, 2006

20

Is REP a measure of “objective support”?

James S. Farris, Pablo A. Goloboff

Journal:

Year:

2008

Language:

english

File:

PDF, 526 KB

english, 2008

21

Weighting against homoplasy improves phylogenetic analysis of morphological data sets

Pablo A. Goloboff, James M. Carpenter, J. Salvador Arias, Daniel Rafael Miranda Esquivel

Journal:

Year:

2008

Language:

english

File:

PDF, 943 KB

english, 2008

22

Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups

Pablo A. Goloboff, Santiago A. Catalano, J. Marcos Mirande, Claudia A. Szumik, J. Salvador Arias, Mari Källersjö, James S. Farris

Journal:

Year:

2009

Language:

english

File:

PDF, 525 KB

english, 2009

23

Phylogenetic morphometrics (I): the use of landmark data in a phylogenetic framework

Santiago A. Catalano, Pablo A. Goloboff, Norberto P. Giannini

Journal:

Year:

2010

Language:

english

File:

PDF, 429 KB

english, 2010

24

Spatial analysis of vicariance: a method for using direct geographical information in historical biogeography

J. Salvador Arias, Claudia A. Szumik, Pablo A. Goloboff

Journal:

Year:

2011

Language:

english

File:

PDF, 374 KB

english, 2011

25

Phylogenetic morphometrics (II): algorithms for landmark optimization

Pablo A. Goloboff, Santiago A. Catalano

Journal:

Year:

2011

Language:

english

File:

PDF, 474 KB

english, 2011

26

DELAYED-RESPONSE PHYLOGENETIC CORRELATION: AN OPTIMIZATION-BASED METHOD TO TEST COVARIATION OF CONTINUOUS CHARACTERS

Norberto P. Giannini, Pablo A. Goloboff

Journal:

Year:

2010

Language:

english

File:

PDF, 463 KB

english, 2010

27

ESTIMATING CHARACTER WEIGHTS DURING TREE SEARCH

Pablo A. Goloboff

Journal:

Year:

1993

File:

PDF, 375 KB

1993

28

HOMOPLASY AND THE CHOICE AMONG CLADOGRAMS

Pablo A. Goloboff

Journal:

Year:

1991

Language:

english

File:

PDF, 1.21 MB

english, 1991

29

RANDOM DATA, HOMOPLASY AND INFORMATION

Pablo A. Goloboff

Journal:

Year:

1991

Language:

english

File:

PDF, 971 KB

english, 1991

30

CHARACTER OPTIMIZATION AND CALCULATION OF TREE LENGTHS

Pablo A. Goloboff

Journal:

Year:

1993

File:

PDF, 155 KB

1993

31

PARSIMONY AND WEIGHTING: A REPLY TO TURNER AND ZANDEE

Pablo A. Goloboff

Journal:

Year:

1995

Language:

english

File:

PDF, 953 KB

english, 1995

32

GB-to-TNT: facilitating creation of matrices from GenBank and diagnosis of results in TNT

Pablo A. Goloboff, Santiago A. Catalano

Journal:

Year:

2012

Language:

english

File:

PDF, 533 KB

english, 2012

33

Detecting areas of endemism with a taxonomically diverse data set: plants, mammals, reptiles, amphibians, birds, and insects from Argentina

Claudia Szumik, Lone Aagesen, Dolores Casagranda, Vanesa Arzamendia, Diego Baldo, Lucía E. Claps, Fabiana Cuezzo, Juan M. Díaz Gómez, Adrián Di Giacomo, Alejandro Giraudo, Pablo Goloboff, Cecilia Gram

Journal:

Year:

2012

Language:

english

File:

PDF, 684 KB

english, 2012

34

METHODS FOR FASTER PARSIMONY ANALYSIS

Pablo A. Goloboff

Journal:

Year:

1996

Language:

english

File:

PDF, 128 KB

english, 1996

35

Estimating Character Weights during Tree Search

Pablo A. Goloboff

Journal:

Year:

1993

File:

PDF, 377 KB

1993

36

Character Optimization and Calculation of Tree Lengths

Pablo A. Goloboff

Journal:

Year:

1993

File:

PDF, 156 KB

1993

37

Self-Weighted Optimization: Tree Searches and Character State Reconstructions under Implied Transformation Costs

Pablo A. Goloboff

Journal:

Year:

1997

Language:

english

File:

PDF, 214 KB

english, 1997

38

Forum – PTP

James M. Carpenter, Pablo A. Goloboff, James S. Farris

Journal:

Year:

1998

Language:

english

File:

PDF, 140 KB

english, 1998

39

METHODS FOR FASTER PARSIMONY ANALYSIS

Pablo A. Goloboff

Journal:

Year:

1996

Language:

english

File:

PDF, 130 KB

english, 1996

40

Tree Searches Under Sankoff Parsimony

Pablo A. Goloboff

Journal:

Year:

1998

Language:

english

File:

PDF, 206 KB

english, 1998

41

Methods for Quick Consensus Estimation

Pablo A. Goloboff, James S. Farris

Journal:

Year:

2001

Language:

english

File:

PDF, 166 KB

english, 2001

42

Analyzing Large Data Sets in Reasonable Times: Solutions for Composite Optima

Pablo A. Goloboff

Journal:

Year:

1999

Language:

english

File:

PDF, 201 KB

english, 1999

43

Semi-strict supertrees

Pablo A Goloboff, Diego Pol

Journal:

Year:

2002

Language:

english

File:

PDF, 204 KB

english, 2002

44

Parsimony, likelihood, and simplicity

Pablo A. Goloboff

Journal:

Year:

2003

Language:

english

File:

PDF, 263 KB

english, 2003

45

Improvements to resampling measures of group support

Pablo A Goloboff, James S Farris, Mari Källersjö, Bengt Oxelman, Martı́n J Ramı́rez, Claudia A Szumik

Journal:

Year:

2003

Language:

english

File:

PDF, 226 KB

english, 2003

46

A New Species of Drymusa (Araneae: Scytodoidea) from Argentina

Pablo A. Goloboff and Martín J. Ramírez

Journal:

Journal of the New York Entomological Society

Year:

1991

Language:

english

File:

PDF, 801 KB

english, 1991

47

A New Species of Calathotarsus (Araneae: Migidae) from Chile

Pablo A. Goloboff

Journal:

Journal of the New York Entomological Society

Year:

1991

Language:

english

File:

PDF, 1.20 MB

english, 1991

48

An Optimality Criterion to Determine Areas of Endemism

Szumik, Claudia A., Cuezzo, Fabiana, Goloboff, Pablo A., Chalup, Adriana E.

Journal:

Systematic Biology

Year:

2002

Language:

english

File:

PDF, 630 KB

english, 2002

49

An artifact caused by undersampling optimal trees in supermatrix analyses of locally sampled characters

Simmons, Mark P., Goloboff, Pablo A.

Journal:

Molecular Phylogenetics and Evolution

Year:

2013

Language:

english

File:

PDF, 923 KB

english, 2013

50

Extended implied weighting

Goloboff, Pablo A.

Journal:

Year:

2014

Language:

english

File:

PDF, 663 KB

english, 2014